Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs7203224 chr16:30061754 G/A ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs73048274 chr3:24813630 C/T CMTM7 chr3:32433163-32524559:+ 0.58 7.1 2.2E-10 Box Plot
THYM rs73182871 chr12:74729469 A/T GAGE12D chrX:49306370-49313697:+ 0.4 7.36 6.57E-11 Box Plot
THYM rs7377135 chr4:73612678 G/A RAB12 chr18:8609443-8639379:+ 0.65 7.3 8.92E-11 Box Plot
THYM rs73855513 chr4:147144102 C/T TFF2 chr21:43766466-43771237:- 0.74 7.12 2.07E-10 Box Plot
THYM rs74400203 chr16:30036049 C/T ZNF254 chr19:24216207-24312763:+ 0.65 7.11 2.19E-10 Box Plot
THYM rs7530494 chr1:79035620 C/T GAGE12J chrX:49178536-49185863:+ 0.76 7.18 1.51E-10 Box Plot
THYM rs7534329 chr1:204309638 A/G GAGE12D chrX:49306370-49313697:+ -0.47 -7.36 6.67E-11 Box Plot
THYM rs75352061 chr6:90116630 C/G BCL2L2 chr14:23767999-23780968:+ 0.67 7.29 9.03E-11 Box Plot
THYM rs75705687 chr7:109567318 T/A AKT1S1 chr19:50372290-50381716:- -0.79 -7.34 7.35E-11 Box Plot
THYM rs75721735 chr16:30079724 T/C ZNF254 chr19:24216207-24312763:+ 0.66 7.11 2.12E-10 Box Plot
THYM rs75845496 chr3:20442817 A/T CDC34 chr19:531712-542092:+ 0.69 7.11 2.2E-10 Box Plot
THYM rs7588293 chr2:139027089 C/A SH3D19 chr4:152023903-152246784:- -0.49 -7.1 2.25E-10 Box Plot
THYM rs75919975 chr5:122040451 C/A GAGE2D chrX:49207160-49214420:+ 0.71 7.2 1.41E-10 Box Plot
THYM rs76171708 chr9:97342045 T/A TFF2 chr21:43766466-43771237:- 0.69 7.5 3.41E-11 Box Plot